Awesome List Updates on Nov 29 - Dec 05, 2021

OpenStreetMap
- osmtogeojson (⭐728): convert OpenStreetMap data to GeoJSON
- osm2geojson (⭐12): converts OSM XML to GeoJSON
- osm2geojson (⭐107): (Python) converts OSM XML and Overpass XML/JSON to GeoJSON
- minjur (⭐59): converts OpenStreetMap data to GeoJSON faster than anything else
- geojsontoosm (⭐24): convert GeoJSON to OSM XML
- geojson2osm (⭐6): convert GeoJSON to OSM XML
- osm-and-geojson (⭐91): convert GeoJSON to OSM XML and OSM XML to GeoJSON
- geojson2osm-es6 (⭐1): convert GeoJSON to OSM XML
- query-overpass (⭐158) CLI to make Overpass query and transform result to GeoJSON. Based on osmtogeojson (⭐728)

5. Awesome Programming for Kids

Pre-Literate

Code-a-pillar - A walking and singing catapiller toy that can be programmed by connecting a series of segments that give instructions.

Upper Elementary

Sphereo - A spherical robot that can be programmed with a block-programming language in a companion app.

6. ALL About RSS

FreshRSS / Outline Processor Markup Language

https://rss.rssforever.com/ by 思有云 - IOIOX

7. Public Apis

Science & Math

API: Noctua

Description: REST API used to access NoctuaSky features

Auth: No

HTTPS: Yes

CORS: Unknown

Video

API: JSON2Video

Description: Create and edit videos programmatically: watermarks,resizing,slideshows,voice-over,text animations

Auth: apiKey

HTTPS: Yes

CORS: No

8. Dive Into Machine Learning

Tools you'll need / If you prefer local installation

Python. Python 3 is the best option.

Jupyter Notebook. (Formerly known as IPython Notebook.)

Some scientific computing packages:
- numpy
- pandas
- scikit-learn
- matplotlib

Other courses / Take my tips with a grain of salt

Data science courses as Jupyter Notebooks:
- Practical Data Science
- Python Data Science Handbook, as Jupyter Notebooks

Coursera's Data Science Specialization

Harvard CS109: Data Science

An epic Quora thread: How can I become a data scientist?

Supplement: Learning Pandas well / Some communities to know about!

Here are some docs I found especially helpful as I continued learning:

Supplement: Troubleshooting / Risks - some starting points

Awesome Production Machine Learning (⭐19k), "a curated list of awesome open source libraries to deploy, monitor, version and scale your machine learning." It includes a section about privacy-preserving ML (⭐19k), by the way!

The High Cost of Maintaining Machine Learning Systems

11 Clever Methods of Overfitting and How to Avoid Them

"So, you want to build an ethical algorithm?" An interactive tool to prompt discussions (source) (⭐72)

More Data Science materials / Aside: Bayesian Statistics and Machine Learning

The free book Probabilistic Programming and Bayesian Methods for Hackers. Made with a "computation/understanding-first, mathematics-second point of view." Uses PyMC (⭐9.1k). It's available in print too!

Like learning by playing? Me too. Try 19 Questions (⭐15), "a machine learning game which asks you questions and guesses an object you are thinking about," and explains which Bayesian statistics techniques it's using!

Time Series Forecasting with Bayesian Modeling by Michael Grogan, a 5-project series - paid but the first project is free.

Bayesian Modelling in Python (⭐2.5k). Uses PyMC (⭐9.1k) as well.

9. Urban and Regional Planning Resources

Educational and Informational Resources / Literature Resources

Automated Decision-Making and the Law Clearinghouse Project - The aim of this clearinghouse project thus is to highlight seminal and impactful articles focused on issues of AI Decision-Making and the law.

10. Awesome Cytodata

Software / Genetic Perturbations

Cytominer (⭐51) - Methods for image-based cell profiling in R.

BioProfiling.jl (⭐13) - Toolkit for filtering and curation of morphological profiles in Julia.

PyCytominer (⭐120) - Methods for image-based cell profiling in Python.

ImJoy - A platform compiling tool for deep-learning based image analyses with a GUI.

Publications / Reviews

Large-scale image-based screening and profiling of cellular phenotypes - Overview of image-based profiling, including its applications and challenges.

How cells explore shape space: A quantitative statistical perspective of cellular morphogenesis - Discussion on the biology of cell shape changes based on quantitative descriptors.

Machine learning and image-based profiling in drug discovery - Introduction to morphological profiling and discussion on what machine learning has to offer.

Publications / Applications

Mapping the perturbome network of cellular perturbations - Image-based profiling and network analysis of drug combinations.

Morphological profiling of human T and NK lymphocytes by high-content cell imaging - Image-based profiling of actin organization at the immunological synapse.

A subcellular map of the human proteome - Classification of protein subcellular location from confocal microscopy images of the Human Protein Atlas.

A multi-scale map of cell structure fusing protein images and interactions - Combining confocal imaging and mass spectrometry representations of proteins to predict physical proximity and characterize cellular organization.

Predicting cell health phenotypes using image-based morphology profiling - Image-based profiles as predictors of apoptosis, proliferation and other cell health descriptors.

Systematic genetics and single‐cell imaging reveal widespread morphological pleiotropy and cell‐to‐cell variability - Analysis of single-cell profiles to characterize variability, pleiotropy and incomplete penetrance.

Large‐scale image‐based profiling of single‐cell phenotypes in arrayed CRISPR‐Cas9 gene perturbation screens - Demonstrates feasibility of imaging arrayed CRISPR screens and offers a way to characterize transfection efficacy in individual cells.

A chemical-genetic interaction map of small molecules using high-throughput imaging in cancer cells - Profiling the morphological changes induced in 1280 compounds in 12 knockout cell lines.

Time-resolved mapping of genetic interactions to model rewiring of signaling pathways - Changes in genetic interactions across time based on multiple morphological descriptors.

High-Content Imaging of Unbiased Chemical Perturbations Reveals that the Phenotypic Plasticity of the Actin Cytoskeleton Is Constrained - Defining morphological clusters in a large compound screen.

A map of directional genetic interactions in a metazoan cell - Characterizing genetic interactions by integrating 21 phenotypic descriptors.

Evaluation of Gene Expression and Phenotypic Profiling Data as Quantitative Descriptors for Predicting Drug Targets and Mechanisms of Action - Benchmarking profiling modalities, including image-based profiles, for mechanism of action prediction.

Publications / Methods

Learning unsupervised feature representations for single cell microscopy images with paired cell inpainting - Selfsupervised method to learn feature representations of single cells in microscopy images without labelled training data.

A BaSiC tool for background and shading correction of optical microscopy images - Illumination-correction method accounting for space- and time-dependent biases.

Cellpose: a generalist algorithm for cellular segmentation - Generalist deep learning model for cell and nucleus segmentation with pre-trained weights.

Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments - DeepCell: collection of deep learning segmentation models.

Improving Phenotypic Measurements in High-Content Imaging Screens - Embedding single-cell and compound profiles using transfer learning, examplified on mechanism of action prediction.

The Multidimensional Perturbation Value - Proposing a score to define significant activity in screens.

CytoGAN: Generative Modeling of Cell Images - Generative network displaying potential for learning latent representation of biological conditions from cell images.

Self-supervised feature extraction from image time series in plant phenotyping using triplet networks - Direct extraction of phenotypic features from plant images.

11. Awesome Developer First

Databases & Spreadsheets

PlanetScale - Hosted managed MySQL database, CI integration & auto scaling.

12. Awesome Selfhosted

Software / Money, Budgeting & Management

IHateMoney - Manage your shared expenses, easily. (Demo, Source Code (⭐1.3k)) BSD-3-Clause Docker/Python

13. Awesome Flutter

Forms / Image Picker

Form Builder (⭐1.6k) - Framework that simplifies building forms, validating fields, reacting to changes, and collecting the final user input by Danvick Miller

Reactive Forms (⭐487) - Model-driven approach to handling Forms inputs and validations, heavily inspired in Angular's Reactive Forms.

14. Awesome Lowcode

Automation

Data Fetcher for Airtable - Connect Airtable to any API using the Data Fetcher app.

15. Awesome Python Typing

Tools / Linters

flake8-type-checking (⭐118) - Plugin to help you guard any type-annotation-only import correctly.

16. Tools

UI Builders

Windframe

17. Awesome Generative Deep Art

Improving Google Colab experience / Deforum

7 ways to load external data into Google Colab | by B. Chen | Towards Data Science

10 tricks for a better Google Colab experience | by Cyprien NIELLY | Towards Data Science

Quickly share ML WebApps from Google Colab using ngrok for Free | by AbdulMajedRaja RS | Towards Data Science

Jupyter Widgets for Interactivity in Google Colab: notebook with examples of using Jupyter Widgets in Colab, allowing interactive inputs

18. Awesome Digital History

Archives and primary sources / Global

Karlsruher Virtueller Katalog - Book search engine for finding hundreds of millions of media in catalogs worldwide.

19. Awesome Ansible

Tutorials

Ansible Tutorial by BlueBanquise team - Basic Ansible tutorial.

20. Awesome Vite

Framework-agnostic Plugins / Integrations

@vitejs/plugin-legacy (⭐74k) - Legacy browser support.

Svelte / Integrations

vite-plugin-svelte (⭐928) - Adds Svelte support. Official plugin of Svelte team.

21. Awesome Neovim

(requires Neovim 0.5)

rmagatti/goto-preview (⭐953) - Previewing native LSP's goto definition calls in floating windows.

Tree-sitter Supported Colorscheme / Diagnostics

andersevenrud/nordic.nvim (⭐175) - A nord-esque colorscheme.

Utility / Diagnostics

stevearc/dressing.nvim (⭐2k) - Improve the built-in vim.ui interfaces with telescope, fzf, etc.

22. Awesome Dotnet

Application Frameworks

Signals (⭐66) - Signals is a .NET5 based framework which focuses on increasing the quality and productivity within development teams by providing them with tools, aspects and processes.

GUI / GUI - Framework

UNO Platform - The only platform for building native mobile, desktop and WebAssembly with C#, XAML from a single codebase. Open source and professionally supported. Website: platform.uno

MVVM / GUI - other

Community Toolkit - Collection of control & helper libraries and samples for various .NET technologies. Contains modern MVVM library, supported by Microsoft. Includes Windows Community Toolkit (⭐6k), MAUI Community Toolkit (⭐2.5k), and Dotnet Community Toolkit (⭐3.4k).

Serialization / GUI - other

FlatSharp (⭐537) - Fast, idiomatic FlatBuffers implementation. Use .fbs files or attributes.

23. Awesome Vscode

C++ / More

Microsoft's tutorial on using VSCode for remote C/C++ development

Libraries / Gradle Tasks

typed-vscode - Generates types from contribution points of your extension manifest

24. Awesome Bash

Command-Line Productivity

zoxide (⭐28k) - A better way to navigate your filesystem. Written in Rust, cross-shell, and much faster than other autojumpers.

25. Awesome Captcha

Generation

captcha-api - Free, fast and reliable Captcha API POWERED BY AI

26. Awesome Broadcasting

Multimedia content processing

SVT Encore (⭐294) - Selfhosted video transcoding plattform, built around FFmpeg.

27. Awesome Preact

Contents / Libraries

Nano Stores (⭐6.3k) - A tiny (199 bytes) state manager with many atomic tree-shakable stores.

28. Awesome React Components

UI Animation / Syntax Highlight

react-voodoo (⭐29) - demo/samples (⭐4) - Additive animation engine allowing complex android/iOs-like animations, rendering sliders on SSR, predictive inertia, multitouch, etc

29. Awesome Quantum Computing

Blogs

Quantumfy - Snippets on the latest quantum computing news and quantum infographics.

30. Awesome Newsletters

Awesome news / Svelte

Weekly Robotics. A weekly newsletter with news, projects and research related to robotics.

31. Awesome Spark

Packages / Notebooks and IDEs

Polynote - Polynote: an IDE-inspired polyglot notebook. It supports mixing multiple languages in one notebook, and sharing data between them seamlessly. It encourages reproducible notebooks with its immutable data model. Originating from Netflix.

Packages / Machine Learning Extension

Microsoft ML for Apache Spark (⭐5.1k) - A distributed ml library with support for LightGBM, Vowpal Wabbit, OpenCV, Deep Learning, Cognitive Services, and Model Deployment.

Packages / Natural Language Processing

spark-nlp (⭐4k) - Natural language processing library built on top of Apache Spark ML.

Resources / Papers

Structured Streaming: A Declarative API for Real-Time Applications in Apache Spark - Structured Streaming is a new high-level streaming API, it is a declarative API based on automatically incrementalizing a static relational query.

32. Awesome Cassandra

Cassandra from Relational / Cassandra as a Service / Managed Cassandra Based on Proprietary Technology

Real-Time Replication from MySQL to Cassandra - Demonstration of migrating data from MySQL to Cassandra.

Cassandra Tutorial for Beginners - Lesson plan for users just starting out with Cassandra.

Integrating with Cassandra / .NET and Cassandra

Cassandra API with .NET - Quickstart guide on how to use .NET and the Azure Cosmos DB Cassandra API to build a profile app.

DataStax C# Driver Documentation - Documentation on the C# Driver for Cassandra from DataStax.

CQL data types to C# types - Documentation on CQL data types to C# types.

Connect to Cassandra with C# - Instaclustr article on how to connect to Cassandra with C#.

Access Amazon Keyspaces with a Cassandra .NET Core Driver - Article shows how to connect to Amazon Keyspaces by using a .NET Core client driver.

Cassandra ADO.NET Driver - Cassandra ADO.NET Data Provider enables user to easily connect to Cassandra data from .NET applications.

Cassandra Pagination with ASP.NET Core C# - Article covering how to create infinite scroll pagination with Cassandra and ASP.NET Core C#.

Miscellaneous / Custom Time Series

Cassandra vs MongoDB - Article comparing the two popular NoSQL databases.

Communities / Custom Time Series

Stack Overflow: Astra DataStax - ASP.NET Core - Answered question regarding connecting DataStax Astra and an ASP.NET Core API published to Microsoft Azure.

Videos / Custom Time Series

Working with .NET and Cassandra/DataStax Enterprise - Getting a C# .NET core application started to work against a Cassandra or DSE database.

33. Awesome Flame

App Releases / Board

Omnichess - Web, Android, iOS - Create and play your own Chess variants! 2-8 players. Online/AI. Square/Hexagonal tiled boards. By Chirag Patel

34. Awesome Circuitpython

Code / Educational

CircuitPython Essentials - Learning the essential functions of CircuitPython.

Talks / Educational

Changing Lives through Open Source, Passion and Mentoring - Changing Lives through Open Source, Passion and Mentoring, Keynote by Kattni Rembor at PyOhio 2019.

CircuitPython 入门 - CircuitPython 程序！An entry level CircuitPython tutorial in Chinese 01: From zero to Hello World (YouTube).

Contributing / Contribution Workflow Overview

Fork this repository (⭐679) on GitHub.

Merge adafruit or main.

35. Awesome Coq

Projects / Libraries

CertiGraph (⭐18) - Library for reasoning about directed graphs and their embedding in separation logic.

36. Awesome Ddd

Video Collections

GlobalAppTesting TechTalks - A vimeo channel focused on DDD and CQRS.

The Art of Discovering Bounded Contexts by Nick Tune - Session from 2017 DevoxxUK on how to define bounded contexts

Blogs

GlobalAppTesting engineering - GlobalAppTesting's engineering blog with materials on practical DDD and CQRS.

37. Awesome WebExtensions

Community

firefox-addon-webextensions tag on Stack Overflow - Relevant questions.

Tools

webpack-target-webextension (⭐48) - Adds code-splitting support to WebExtensions build with Webpack.

38. Awesome Machine Learning

Python / General-Purpose Machine Learning

imbalanced-ensemble (⭐372) - Python toolbox for quick implementation, modification, evaluation, and visualization of ensemble learning algorithms for class-imbalanced data. Supports out-of-the-box multi-class imbalanced (long-tailed) classification.